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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs71563537 chr7:97471899 C/T TECPR1 chr7:97843936-97881563:- 0.7 5.28 2.53E-6 Box Plot
ACC rs71563539 chr7:97476580 C/G TECPR1 chr7:97843936-97881563:- 0.79 5.17 3.75E-6 Box Plot
ACC rs71563540 chr7:97476643 G/A TECPR1 chr7:97843936-97881563:- 0.79 5.17 3.75E-6 Box Plot
ACC rs71566220 chr7:76341468 T/C POMZP3 chr7:76239303-76256578:- 0.86 6.02 1.8E-7 Box Plot
ACC rs71566230 chr8:71594905 CT/C XKR9 chr8:71581600-71702606:+ 0.68 6.86 8.24E-9 Box Plot
ACC rs71569604 chr7:64550618 GAT/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs7157377 chr14:74441176 T/C LIN52 chr14:74551499-74667938:+ 0.56 5.81 3.8E-7 Box Plot
ACC rs7160518 chr14:65378698 G/T CHURC1 chr14:65381079-65411309:+ 0.77 5.06 5.54E-6 Box Plot
ACC rs7161037 chr14:74433129 C/A LIN52 chr14:74551499-74667938:+ 0.57 6.01 1.82E-7 Box Plot
ACC rs71654350 chr5:96278948 T/G ERAP2 chr5:96211643-96255420:+ 0.94 11.24 1.6E-15 Box Plot
ACC rs716848 chr5:96265000 C/A ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs71918709 chr6:86412575 CCACTG/C SNHG5 chr6:86370668-86388454:- 0.68 6.09 1.38E-7 Box Plot
ACC rs720228 chr2:99704547 A/G TSGA10 chr2:99613724-99771427:- 0.55 5.36 1.9E-6 Box Plot
ACC rs720229 chr2:99704273 T/C TSGA10 chr2:99613724-99771427:- 0.58 5.53 1.04E-6 Box Plot
ACC rs7203961 chr16:50391764 C/T CYLD chr16:50775961-50835846:+ 0.58 5.32 2.21E-6 Box Plot